Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-33a in CA Breast Sorlie Cluster 11 Table contains all genes in the CA Breast Sorlie cluster number 11. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-33a 10057 ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 [Source:HGNC Symbol;Acc:56] zzz999 23199 KIAA0182 KIAA0182 [Source:HGNC Symbol;Acc:28979] T 10134 BCAP31 B-cell receptor-associated protein 31 [Source:HGNC Symbol;Acc:16695] zzz999 81562 LMAN2L lectin, mannose-binding 2-like [Source:HGNC Symbol;Acc:19263] zzz999 1365 CLDN3 claudin 3 [Source:HGNC Symbol;Acc:2045] zzz999 10396 ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:HGNC Symbol;Acc:13531] P T 9054 NFS1 NFS1 nitrogen fixation 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15910] zzz999 84923 FAM104A family with sequence similarity 104, member A [Source:HGNC Symbol;Acc:25918] zzz999 9267 CYTH1 cytohesin 1 [Source:HGNC Symbol;Acc:9501] zzz999 3992 FADS1 fatty acid desaturase 1 [Source:HGNC Symbol;Acc:3574] zzz999 22818 COPZ1 coatomer protein complex, subunit zeta 1 [Source:HGNC Symbol;Acc:2243] zzz999 2664 GDI1 GDP dissociation inhibitor 1 [Source:HGNC Symbol;Acc:4226] zzz999 5189 PEX1 peroxisomal biogenesis factor 1 [Source:HGNC Symbol;Acc:8850] zzz999 2548 GAA glucosidase, alpha; acid [Source:HGNC Symbol;Acc:4065] zzz999 55832 CAND1 cullin-associated and neddylation-dissociated 1 [Source:HGNC Symbol;Acc:30688] P T 27352 SGSM3 small G protein signaling modulator 3 [Source:HGNC Symbol;Acc:25228] zzz999 54708 MARCH5 membrane-associated ring finger (C3HC4) 5 [Source:HGNC Symbol;Acc:26025] T 51608 GET4 golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:21690] zzz999 10653 SPINT2 serine peptidase inhibitor, Kunitz type, 2 [Source:HGNC Symbol;Acc:11247] zzz999 5394 EXOSC10 exosome component 10 [Source:HGNC Symbol;Acc:9138] zzz999 999 CDH1 cadherin 1, type 1, E-cadherin (epithelial) [Source:HGNC Symbol;Acc:1748] zzz999 5349 FXYD3 FXYD domain containing ion transport regulator 3 [Source:HGNC Symbol;Acc:4027] zzz999 5720 PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) [Source:HGNC Symbol;Acc:9568] zzz999 9014 TAF1B TATA box binding protein (TBP)-associated factor, RNA polymerase I, B, 63kDa [Source:HGNC Symbol;Acc:11533] zzz999 10922 FASTK Fas-activated serine/threonine kinase [Source:HGNC Symbol;Acc:24676] zzz999 81857 MED25 mediator complex subunit 25 [Source:HGNC Symbol;Acc:28845] zzz999 10847 SRCAP Snf2-related CREBBP activator protein [Source:HGNC Symbol;Acc:16974] zzz999 7542 ZFPL1 zinc finger protein-like 1 [Source:HGNC Symbol;Acc:12868] zzz999 56954 NIT2 nitrilase family, member 2 [Source:HGNC Symbol;Acc:29878] zzz999 987 LRBA LPS-responsive vesicle trafficking, beach and anchor containing [Source:HGNC Symbol;Acc:1742] T 23779 ARHGAP8 Rho GTPase activating protein 8 [Source:HGNC Symbol;Acc:677] zzz999 3654 IRAK1 interleukin-1 receptor-associated kinase 1 [Source:HGNC Symbol;Acc:6112] zzz999 780 DDR1 discoidin domain receptor tyrosine kinase 1 [Source:HGNC Symbol;Acc:2730] zzz999 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] zzz999 10260 DENND4A DENN/MADD domain containing 4A [Source:HGNC Symbol;Acc:24321] zzz999 8896 BUD31 BUD31 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:29629] zzz999 10959 TMED2 transmembrane emp24 domain trafficking protein 2 [Source:HGNC Symbol;Acc:16996] zzz999 116840 CNTROB centrobin, centrosomal BRCA2 interacting protein [Source:HGNC Symbol;Acc:29616] zzz999 57708 MIER1 mesoderm induction early response 1 homolog (Xenopus laevis) [Source:HGNC Symbol;Acc:29657] zzz999 6683 SPAST spastin [Source:HGNC Symbol;Acc:11233] P T 256281 NUDT14 nudix (nucleoside diphosphate linked moiety X)-type motif 14 [Source:HGNC Symbol;Acc:20141] zzz999 27183 VPS4A vacuolar protein sorting 4 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:13488] zzz999 115362 GBP5 guanylate binding protein 5 [Source:HGNC Symbol;Acc:19895] zzz999 79774 GRTP1 growth hormone regulated TBC protein 1 [Source:HGNC Symbol;Acc:20310] zzz999 7718 ZNF165 zinc finger protein 165 [Source:HGNC Symbol;Acc:12953] zzz999 8775 NAPA N-ethylmaleimide-sensitive factor attachment protein, alpha [Source:HGNC Symbol;Acc:7641] zzz999 80271 ITPKC inositol-trisphosphate 3-kinase C [Source:HGNC Symbol;Acc:14897] zzz999 79364 ZXDC ZXD family zinc finger C [Source:HGNC Symbol;Acc:28160] zzz999 5663 PSEN1 presenilin 1 [Source:HGNC Symbol;Acc:9508] zzz999 8120 AP3B2 adaptor-related protein complex 3, beta 2 subunit [Source:HGNC Symbol;Acc:567] zzz999 22931 RAB18 RAB18, member RAS oncogene family [Source:HGNC Symbol;Acc:14244] zzz999 9325 TRIP4 thyroid hormone receptor interactor 4 [Source:HGNC Symbol;Acc:12310] zzz999 7726 TRIM26 tripartite motif containing 26 [Source:HGNC Symbol;Acc:12962] T 55239 OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1 [Source:HGNC Symbol;Acc:25585] zzz999 9375 TM9SF2 transmembrane 9 superfamily member 2 [Source:HGNC Symbol;Acc:11865] zzz999 2580 GAK cyclin G associated kinase [Source:HGNC Symbol;Acc:4113] zzz999 6249 CLIP1 CAP-GLY domain containing linker protein 1 [Source:HGNC Symbol;Acc:10461] zzz999 8503 PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) [Source:HGNC Symbol;Acc:8981] P T 23042 PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 [Source:HGNC Symbol;Acc:28995] zzz999 49856 WRAP73 WD repeat containing, antisense to TP73 [Source:HGNC Symbol;Acc:12759] zzz999 113263 GLCCI1 glucocorticoid induced transcript 1 [Source:HGNC Symbol;Acc:18713] P T 10585 POMT1 protein-O-mannosyltransferase 1 [Source:HGNC Symbol;Acc:9202] zzz999 6892 TAPBP TAP binding protein (tapasin) [Source:HGNC Symbol;Acc:11566] zzz999 2530 FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) [Source:HGNC Symbol;Acc:4019] zzz999 3611 ILK integrin-linked kinase [Source:HGNC Symbol;Acc:6040] zzz999 10127 ZNF263 zinc finger protein 263 [Source:HGNC Symbol;Acc:13056] zzz999 9757 zzz999 Histone-lysine N-methyltransferase MLL4 [Source:UniProtKB/Swiss-Prot;Acc:Q9UMN6] zzz999 5074 PAWR PRKC, apoptosis, WT1, regulator [Source:HGNC Symbol;Acc:8614] zzz999 10552 ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa [Source:HGNC Symbol;Acc:703] zzz999 11079 RER1 RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:30309] zzz999 369 ARAF v-raf murine sarcoma 3611 viral oncogene homolog [Source:HGNC Symbol;Acc:646] zzz999 10075 HUWE1 HECT, UBA and WWE domain containing 1 [Source:HGNC Symbol;Acc:30892] zzz999 79767 ELMO3 engulfment and cell motility 3 [Source:HGNC Symbol;Acc:17289] zzz999 8242 KDM5C lysine (K)-specific demethylase 5C [Source:HGNC Symbol;Acc:11114] zzz999 58490 RPRD1B regulation of nuclear pre-mRNA domain containing 1B [Source:HGNC Symbol;Acc:16209] zzz999 55324 ABCF3 ATP-binding cassette, sub-family F (GCN20), member 3 [Source:HGNC Symbol;Acc:72] zzz999 3028 HSD17B10 hydroxysteroid (17-beta) dehydrogenase 10 [Source:HGNC Symbol;Acc:4800] zzz999 66004 LYNX1 Ly6/neurotoxin 1 [Source:HGNC Symbol;Acc:29604] zzz999 51747 LUC7L3 LUC7-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:24309] P T 24148 PRPF6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15860] zzz999 5436 POLR2G polymerase (RNA) II (DNA directed) polypeptide G [Source:HGNC Symbol;Acc:9194] zzz999 51366 UBR5 ubiquitin protein ligase E3 component n-recognin 5 [Source:HGNC Symbol;Acc:16806] P T 55718 POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD) [Source:HGNC Symbol;Acc:30347] zzz999 6385 SDC4 syndecan 4 [Source:HGNC Symbol;Acc:10661] zzz999 50814 NSDHL NAD(P) dependent steroid dehydrogenase-like [Source:HGNC Symbol;Acc:13398] zzz999 51660 BRP44L brain protein 44-like [Source:HGNC Symbol;Acc:21606] zzz999 2261 FGFR3 fibroblast growth factor receptor 3 [Source:HGNC Symbol;Acc:3690] zzz999 5064 PALM paralemmin [Source:HGNC Symbol;Acc:8594] zzz999 6909 TBX2 T-box 2 [Source:HGNC Symbol;Acc:11597] zzz999 4814 NINJ1 ninjurin 1 [Source:HGNC Symbol;Acc:7824] zzz999 6729 SRP54 signal recognition particle 54kDa [Source:HGNC Symbol;Acc:11301] zzz999

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